Bioinformatics: Analysis and Discovery

Friday, August 22, 2014: 1:30 PM-3:00 PM
Cypress Room (The Westin Bayshore)
Moderator:
James M Reecy
1:30 PM
166
Fine Scale Population Structure of Global Cattle Breeds using Dense Haplotype Data
Markus Neuditschko, Agroscope - Swiss National Stud Farm; Mehar S Khatkar, Reprogen Animal Bioscience Group, Faculty of Veterinary Science, University of Sydney; Herman W Raadsma, Reprogen Animal Bioscience Group, Faculty of Veterinary Science, University of Sydney
1:45 PM
167
Runs of homozygosity and distribution of functional variants in cattle genome
Qianqian Zhang, Animal Breeding and Genomics Centre, Wageningen UR Livestock Research; Bernt Guldbrandtsen, Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University; Mirte Bosse, Animal Breeding and Genomics Centre, Wageningen UR Livestock Research; Mogens Sandø Lund, Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University; Goutam Sahana, Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University
2:00 PM
168
Systems Genetics Analysis of Obesity in a Porcine Model using WISH Network Method
Lisette JA Kogelman, Department of Clinical Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen; Sameer D Pant, Department of Clinical Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen; Juha Karjalainen, Department of Genetics, University Medical Center Groningen; Lude Franke, Department of Genetics, University Medical Center Groningen; Merete Fredholm, Department of Clinical Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen; Haja N Kadarmideen, Department of Clinical Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen
2:15 PM
169
Separating signal from noise Estimating SNP-effects and decomposing genetic variation to the level of QTLs in pure breed Duroc pigs
Pernille M Sarup, Center of Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University; Just Jensen, Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University; Stefan M Edwards, Center of Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University; Tage Ostersen, Pig Research Centre; Peter Sørensen, Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University; Mark Antione Henryon, Pig Research Centre
2:30 PM
170
Regulatory and coding genome regions are enriched for trait associated variants in dairy cattle
Lambros Koufariotis, Dairy Futures Co-operative Research Centre; Yi-Ping Phoebe Chen, Faculty of Science, Technology and Engineering, La Trobe University; Sunduimijid Bolormaa, CRC for Sheep Industry Innovation; Ben J Hayes, The Department of Environment and Primary Industries
2:45 PM
171
A Tale Of Two Birds: SNP discovery and genomic architecture of highly inbred Leghorn and Fayoumi chicken breeds using whole genome resequencing
Damarius S Fleming, Iowa State University; James E. Koltes, Iowa State University; E. Fritz-Waters, Iowa State University; James M Reecy, Iowa State University; Susan J Lamont, Iowa State University