Analysis of Next Generation Squencing (NGS) Data

Tuesday, March 18, 2014: 1:30 PM-5:00 PM
308-309 (Community Choice Credit Union Convention Center)
Chair:
Juan P. Steibel
1:30 PM
Introductory Remarks
1:40 PM
20
Utilization of Sequence on Relatives to Improve Analysis of Individuals' Low-coverage NGS data
R. Mark Thallman, USDA, ARS, U.S. Meat Animal Research Center; Ted S Kalbfleisch, Intrepid Bioinformatics
2:25 PM
21
Applications of High-Throughput Sequencing for Fertility, Demography, and Genome Improvement
Jared E Decker, University of Missouri; Robert D Schnabel, University of Missouri; Jeremy F Taylor, University of Missouri
3:10 PM
Break
3:25 PM
22
HMM-ASE: A Hidden Markov algorithm for Ascertaining cSNP Genotypes from RNA Sequence Data in Presence of Allelic Imbalance
Heng Wang, Michigan State University
Recorded Presentation (flv) Audio File
4:10 PM
23
Computational resources to facilitate variant discovery and analysis
James M Reecy, Iowa State University; C. Baes, Qualitas AG; E. Fritz-Waters, Iowa State University; James E. Koltes, Iowa State University; M. Dolezal, Università degli Studi di Milano; B. Bapst, Qualitas AG; C. Flury, Bern University of Applied Sciences; H. Signer-Hasler, Bern University of Applied Sciences; C. Stricker, agn Genetics GmbH; Rohan L Fernando, Iowa State University; Dorian J. Garrick, Iowa State University; Fritz Schmitz-Hsu, Swissgenetics; B. Gredler, Bern University of Applied Sciences; Matt Vaugh, Texas Advance Computing Center, University of Texas
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